The University of Arizona
Tour: viewSingleTCW
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viewSingleTCW - View and Query Single Species
Start | Sequence Table | Sequence Detail | Basic Sequence | AnnoDB Hits | GO Annotations | Pairs | Find Hits

viewSingleTCW provides query and display of the sTCW database built with runSingleTCW. It allows the user to explore all aspects of their data and annotation.

Overview: Overview is a link to the complete overview, where the first part is shown on the right.

Reproduce are instructions on how obtain the table of results corresponding to the overview statistics.

Find Hits: Search an user supplied sequence against the sequences in the database or an external database.

The items under this label produces the Sequence Table. A row can be selected to view the Sequence Details.

Basic Queries
Sequences: Search by seqID or remark.

AnnoDB Hits: Search by hitID, taxonomy, e-value, etc.

GO Annotation: Search by GO term, term_type, etc.

The initial viewSingleTCW display.

Similar Pairs: The items under this label produces a Pairs table of similar sequences.

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