SyMAP (Synteny Mapping and Analysis Program) v2.0 is a software package for detecting and displaying syntenic relationships between an FPC map and sequenced genome (see Soderlund et al. 2007).

Coming soon: SyMAP v3.0 includes sequence-to-sequence comparison, faster loading & synteny-finding, a user-friendly Project Manager, and enhanced graphics as shown at our demo site www.symapdb.org.
If you would like to obtain the pre-release version, email us at symap@agcol.arizona.edu.

This work was funded by the National Science Foundation, grant #0115903.

Download Release Notes Documentation   Web User Guide   Installation Guide Links using SyMAP Package   Demo   SyMAP website

Dotplot: View larger image

Alignment: View larger image

Reference

C. Soderlund, W. Nelson, A. Shoemaker and A. Paterson (2006) SyMAP:A system for discovering and viewing syntenic regions of FPC maps. Genome Research 16:1159-1168. Download

NSF Disclaimer

Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.