The Java GBrowse is a Java Applet-based implementation of the original CGI-based GMOD 
GBrowse web application developed by GMOD. Although similar to the CGI-based GBrowse 
application, Java GBrowse has some new functionality, including more search options, 
and a modified navigation interface. With a few exceptions, Java GBrowse can be used 
with the same configuration and database as the original CGI-based GBrowse. 

Contents of the file ( Java_GBrowse_1.0.2.zip ):

 - GenomeBrowser.jar is a Java jar file which runs the Java GBrowse
 - GBrowseDocs/ folder contains software and user documentation files
 - Sample/ folder contains demo files which includes demo configuration file and demo database file
  
Documentation: 

 - To install on your system, please see the software documentation file 
   gbrowse_configuration.htm in GBrowseDocs/GBrowseConfiguration folder or at
   http://agcol.arizona.edu/software/java_gbrowse/Java_GBrowse_1.0.2/GBrowseDocs/GBrowseConfiguration/gbrowse_configuration.htm

 - To learn how to use the system, please see user documenation file gbrowse_help.htm 
   in GBrowseDocs/GBrowseHelp folder or at
   http://agcol.arizona.edu/software/java_gbrowse/Java_GBrowse_1.0.2/GBrowseDocs/GBrowseHelp/gbrowse_help.htm

 - To install the demo on your system, please see the Installing demo documentation at
    http://agcol.arizona.edu/software/java_gbrowse/Java_GBrowse_1.0.2/GBrowseDocs/installing_demo.htm


For support & bugs email to:

www@agcol.arizona.edu


Authors:

Dr. Cari Soderlund - Project Leader
Vishal Pampanwar - Assistant Project Leader
Brian Vollmer - Grad Student 
Richard Carey - REU Student 


Release Notes:

Version 1.0.2
- changed database queries to support MySQL v5.0.12 syntax change.