This work was funded
in part by NSF grant
#0321724, NSF grant
and by the Initiative for Future Agriculture and Food Systems Grant no. 2001-52100-11292 from the USDA Cooperative State Research, Education, and Extension Service.
USDA-IFAFS grant #11180, NSF grant #0321724 and NSF grant
The Java GBrowse is a Java Applet-based implementation
of the original CGI-based GMOD GBrowse web application developed by GMOD.
Although similar to
the CGI-based GBrowse application, Java GBrowse has some new functionality,
including more search options, and a modified navigation
interface. With a few exceptions, Java GBrowse can be used with
the same configuration and database as the original CGI-based GBrowse.
This project was inspired by the original CGI-based GMOD
Generic Genome Browser web application. The volvox example and
portions of the configuration guide were taken from the original
GMOD GBrowse project.
Stein, L.D., Mungall, C., Shu, S., Caudy, M., Mangone, M., Day, A.,
Nickerson, E., Stajich, J.E., Harris, T.W., Arva, A., and Lewis, S. (2002)
The generic genome browser: a building block for a model organism system
database. Genome Research 12:1599-610. GMOD website: